Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824791.1_cds_XP_016502077.1_15755
CDS Infomation

[gene=LOC107820331] [db_xref=GeneID:107820331] [protein=probable WRKY transcription factor 4] [protein_id=XP_016502077.1] [location=complement(join(2590..2872,3989..4147,4245..4948,6230..6625))] [gbkey=CDS]
Sequence

ATGGGGGAAAAGTTCAAAGCTTCAGCAGTTTCAGAGCTAACAATCCCACCTCGAGCCCCT
AATTTTGAAGCATTTTTTGGCGGTGGAAATATGCCCTATTTTAGCCCAGGTCCAATGACA
CTTGTCTCCAGCTTCTTCTCGGAATCCGAATACCCGTCTTTCTCCCAGCTTCTTGCTGGA
GCTATGGCTTCTCCACTAGCAAAACCACCGACTCTTTTCCCTGAAAATTCAACCGGAGAA
GAGAATTGTAAAGAGGGGAATCAGAAGAATTTAGGGTATAAGCAGAATCAACCCATGAGT
TTAATGTTGGCTCAAAATTCTCCTTTGTTTATGATTCCCACTGGTCTTACTCCTTCTGGA
TTGCTTAATTCACCTGGGTTTCTTTCCCCTCTTCAGAGTCCTTTTGGAATGTCACACCAG
CAGGCCCTAGCACACGTCACAGCGCAGGCAGCATTATCCCAGTCTTACTTACAAACCCAA
GCTGAGTATCATTTCTCCTCGCAAGGGACATCAGCTCAAGTATTAGGAATTGAAACGTCG
ACCGAGCCATCAGAATGTTCTTTACAACCTCAATTAGATGCTGTGCCGTCAGACCAGCAG
ACCAAGAAAATTGAACTGCCACTGGTTTCTCAATCTGAGGACAAGCCATCTTTTGCTTCT
GTCGATAGACCAGCTTGTGATGGTTACAACTGGAGGAAGTATGGACAGAAGATGGTTAAA
GCAAGTGAATGTCCTCGGAGCTACTATAAATGCACACATCTCAAGTGTCCTGTCAAGAAG
AAGGTCGAGCTATCCATTGATGGTCACATAACTGAGATCACATATAAAGGCCATCACAAC
CATGAACTTCCTCAACCAAGCAAACGCAGAAGAGATAGTTGTGCTCAGGATGGTTCAGAT
TGCTCCAAAGCTAAACCTGAAAGCGAAATGCTGAGTGGGACCGAAGTCAACGGCTTAAAT
GGTGCTCTCCCTGGTCGTTCTGGACAAGTGTCTACTGAAATGGCATCTGGACTTCTTCTC
TCTAATGAATGTGATAAAATTGAGGACACTGCAACAGCAGCAGAAGAGGGACATGATGAT
GAACCAAATGTGAAGAGAATGAAGACAGCTGTTGAGGCTCCTAATCTCGCTTCATCACAT
AAAGCAGTATCAGAATCCAAGATTGTTGTGCAGACAAGGAGTGAAGTAGACATTTTGGAT
GACGGGTTCAAGTGGCGAAAATATGGGCAGAAAGTGGTGAAGGGGAATCATCATCCGAGG
AGTTATTATCGCTGCACATATCCTGGATGCAATGTCCGCAAACATGTCGAAAGGGCTTCA
GCAGATCCAAAAGCTGTCATAACAACATATGAAGGCAAACACAATCACGATATTCCCATT
GCTAGAAACAGAAGTCATAGCACAGCCCAAGATAGTACTCGCCAGTTGAACGAGCAAGAC
GTTGCAACTTGGAGGCCTTCACTTCATGAAAATGTTGCTTTTCATAACAACAATGAAATA
CCAGTGTGTAGGCAGCTGAAAGAGGAACAGATTGCAGCATAA

Peptide Sequence

PEP ID

XP_016502077.1
PEP Infomation

PREDICTED: probable WRKY transcription factor 4 [Nicotiana tabacum]
Sequence

MGEKFKASAVSELTIPPRAPNFEAFFGGGNMPYFSPGPMTLVSSFFSESEYPSFSQLLAG
AMASPLAKPPTLFPENSTGEENCKEGNQKNLGYKQNQPMSLMLAQNSPLFMIPTGLTPSG
LLNSPGFLSPLQSPFGMSHQQALAHVTAQAALSQSYLQTQAEYHFSSQGTSAQVLGIETS
TEPSECSLQPQLDAVPSDQQTKKIELPLVSQSEDKPSFASVDRPACDGYNWRKYGQKMVK
ASECPRSYYKCTHLKCPVKKKVELSIDGHITEITYKGHHNHELPQPSKRRRDSCAQDGSD
CSKAKPESEMLSGTEVNGLNGALPGRSGQVSTEMASGLLLSNECDKIEDTATAAEEGHDD
EPNVKRMKTAVEAPNLASSHKAVSESKIVVQTRSEVDILDDGFKWRKYGQKVVKGNHHPR
SYYRCTYPGCNVRKHVERASADPKAVITTYEGKHNHDIPIARNRSHSTAQDSTRQLNEQD
VATWRPSLHENVAFHNNNEIPVCRQLKEEQIAA

Transcript Sequence

Gene sequence data has not been registered.